DRUG BINDING INTERFACES MAPPED TO 'Clostridioides difficile'

List of Binding Interfaces
(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
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DrReposER ID PDB Ligand Organism Macromolecule Pfam Res. Interface HETATM
4NMY_A_VIBA401 4nmy VIB

DB00152
(Thiamine)
Clostridioides
difficile
ABC-TYPE TRANSPORT
SYSTEM,
EXTRACELLULAR
SOLUTE-BINDING
PROTEIN
PF09084
(NMT1)
11 TRP A  12
ASN A  15
TYR A  62
GLU A  64
SER A  90
TRP A 114
TRP A 158
PHE A 160
TRP A 163
TYR A 189
THR A 191
VIB A 401
4NMY_B_VIBB401 4nmy VIB

DB00152
(Thiamine)
Clostridioides
difficile
ABC-TYPE TRANSPORT
SYSTEM,
EXTRACELLULAR
SOLUTE-BINDING
PROTEIN
no annotation 10 TRP B  12
ASN B  15
TYR B  62
GLU B  64
SER B  90
TRP B 114
TRP B 158
TRP B 163
TYR B 189
THR B 191
VIB B 401
4WOZ_B_MN9B401 4woz MN9

DB00141
(N-
Acetyl-
D-
glucosamine)
Clostridioides
difficile
N-ACETYLNEURAMINATE
LYASE
None
PF00701
(DHDPS)
6 SER B 158
LEU B 159
ASP B 160
TYR B 182
LEU B 183
THR A 254
MN9 B 401
4WOZ_F_MN9F401 4woz MN9

DB00141
(N-
Acetyl-
D-
glucosamine)
Clostridioides
difficile
N-ACETYLNEURAMINATE
LYASE
None 5 LEU F 159
ASP F 160
TYR F 182
LEU F 183
THR H 254
MN9 F 401